Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfrsf17O88472 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Phf7-203ENSMUST00000226565 1971 ntBASIC15.65■□□□□ 0.1
Tnfrsf17O88472 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf17O88472 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Gm25990-201ENSMUST00000102440 86 ntBASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Gm6089-201ENSMUST00000197666 938 ntBASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.64■□□□□ 0.09
Tnfrsf17O88472 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf17O88472 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gm15173-201ENSMUST00000122049 433 ntBASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gm25911-201ENSMUST00000157621 56 ntBASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.63■□□□□ 0.09
Tnfrsf17O88472 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Tnfrsf17O88472 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.61■□□□□ 0.09
Tnfrsf17O88472 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms