Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Gm7222-201ENSMUST00000117512 906 ntBASIC16.4■□□□□ 0.22
Cacna1hO88427 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.4■□□□□ 0.22
Cacna1hO88427 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.39■□□□□ 0.21
Cacna1hO88427 Gm11764-201ENSMUST00000120221 623 ntBASIC16.39■□□□□ 0.21
Cacna1hO88427 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.39■□□□□ 0.21
Cacna1hO88427 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Grk6-206ENSMUST00000224995 2971 ntBASIC16.39■□□□□ 0.21
Cacna1hO88427 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1hO88427 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cacna1hO88427 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.38■□□□□ 0.21
Cacna1hO88427 Gm5312-201ENSMUST00000203728 547 ntBASIC16.38■□□□□ 0.21
Cacna1hO88427 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.38■□□□□ 0.21
Cacna1hO88427 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1hO88427 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.38■□□□□ 0.21
Cacna1hO88427 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.38■□□□□ 0.21
Cacna1hO88427 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cacna1hO88427 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cacna1hO88427 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cacna1hO88427 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cacna1hO88427 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.37■□□□□ 0.21
Cacna1hO88427 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.37■□□□□ 0.21
Cacna1hO88427 Gm25745-201ENSMUST00000174945 133 ntBASIC16.37■□□□□ 0.21
Cacna1hO88427 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1hO88427 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.37■□□□□ 0.21
Cacna1hO88427 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1hO88427 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cacna1hO88427 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.36■□□□□ 0.21
Cacna1hO88427 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
Cacna1hO88427 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.36■□□□□ 0.21
Cacna1hO88427 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1hO88427 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cacna1hO88427 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Cacna1hO88427 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cacna1hO88427 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.35■□□□□ 0.21
Cacna1hO88427 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Cacna1hO88427 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Gm44450-201ENSMUST00000199528 114 ntBASIC16.35■□□□□ 0.21
Cacna1hO88427 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cacna1hO88427 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1hO88427 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.35■□□□□ 0.21
Cacna1hO88427 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1hO88427 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms