Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16■□□□□ 0.15
Tgfbr3O88393 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tgfbr3O88393 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tgfbr3O88393 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm18733-201ENSMUST00000173950 856 ntBASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm29707-201ENSMUST00000196325 491 ntBASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm18421-201ENSMUST00000204122 625 ntBASIC15.99■□□□□ 0.15
Tgfbr3O88393 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm5867-201ENSMUST00000063197 592 ntBASIC15.99■□□□□ 0.15
Tgfbr3O88393 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tgfbr3O88393 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Gm12644-201ENSMUST00000119935 606 ntBASIC15.98■□□□□ 0.15
Tgfbr3O88393 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.98■□□□□ 0.15
Tgfbr3O88393 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.98■□□□□ 0.15
Tgfbr3O88393 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tgfbr3O88393 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Gm18195-201ENSMUST00000207604 706 ntBASIC15.97■□□□□ 0.15
Tgfbr3O88393 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.97■□□□□ 0.15
Tgfbr3O88393 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tgfbr3O88393 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tgfbr3O88393 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tgfbr3O88393 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Tgfbr3O88393 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Tgfbr3O88393 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Tgfbr3O88393 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tgfbr3O88393 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Tgfbr3O88393 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms