Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10226O88253 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10226O88253 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gm10226O88253 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10226O88253 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10226O88253 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gm10226O88253 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Gm10226O88253 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Gm10226O88253 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Gm10226O88253 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Gm10226O88253 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.02□□□□□ -0.33
Gm10226O88253 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Gm10226O88253 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.02□□□□□ -0.33
Gm10226O88253 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.01□□□□□ -0.33
Gm10226O88253 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm10226O88253 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Gm10226O88253 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Mir770-201ENSMUST00000103252 94 ntBASIC13.01□□□□□ -0.33
Gm10226O88253 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Gm10226O88253 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.01□□□□□ -0.33
Gm10226O88253 Gm44450-201ENSMUST00000199528 114 ntBASIC13.01□□□□□ -0.33
Gm10226O88253 Gm17808-201ENSMUST00000200859 894 ntBASIC13.01□□□□□ -0.33
Gm10226O88253 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.01□□□□□ -0.33
Gm10226O88253 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gm10226O88253 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Gm10226O88253 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Gm10226O88253 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Gm10226O88253 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13□□□□□ -0.33
Gm10226O88253 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13□□□□□ -0.33
Gm10226O88253 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13□□□□□ -0.33
Gm10226O88253 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13□□□□□ -0.33
Gm10226O88253 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13□□□□□ -0.33
Gm10226O88253 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Gm11950-201ENSMUST00000121615 838 ntBASIC13□□□□□ -0.33
Gm10226O88253 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Gm10226O88253 Gm6623-201ENSMUST00000173570 544 ntBASIC13□□□□□ -0.33
Gm10226O88253 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Gm9954-202ENSMUST00000198686 4725 ntBASIC13□□□□□ -0.33
Gm10226O88253 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13□□□□□ -0.33
Gm10226O88253 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Gm10226O88253 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm10226O88253 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm10226O88253 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Gm10226O88253 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm10226O88253 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gm10226O88253 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gm10226O88253 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.99□□□□□ -0.33
Gm10226O88253 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm10226O88253 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gm10226O88253 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm10226O88253 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm10226O88253 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gm10226O88253 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.98□□□□□ -0.33
Gm10226O88253 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms