Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pdlim1O70400 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pdlim1O70400 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pdlim1O70400 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pdlim1O70400 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim1O70400 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim1O70400 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pdlim1O70400 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Gm10013-201ENSMUST00000106074 672 ntBASIC16.64■□□□□ 0.25
Pdlim1O70400 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pdlim1O70400 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pdlim1O70400 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.64■□□□□ 0.25
Pdlim1O70400 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pdlim1O70400 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Gm26039-201ENSMUST00000158152 144 ntBASIC16.63■□□□□ 0.25
Pdlim1O70400 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim1O70400 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pdlim1O70400 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.63■□□□□ 0.25
Pdlim1O70400 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pdlim1O70400 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Gm21559-201ENSMUST00000220638 855 ntBASIC16.62■□□□□ 0.25
Pdlim1O70400 Gm18115-201ENSMUST00000221209 621 ntBASIC16.62■□□□□ 0.25
Pdlim1O70400 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Gm8587-201ENSMUST00000076538 843 ntBASIC16.62■□□□□ 0.25
Pdlim1O70400 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.62■□□□□ 0.25
Pdlim1O70400 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim1O70400 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pdlim1O70400 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim1O70400 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms