Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb5O70309 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb5O70309 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Itgb5O70309 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Itgb5O70309 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.69■□□□□ 0.58
Itgb5O70309 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.69■□□□□ 0.58
Itgb5O70309 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Itgb5O70309 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Itgb5O70309 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.68■□□□□ 0.58
Itgb5O70309 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.68■□□□□ 0.58
Itgb5O70309 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.68■□□□□ 0.58
Itgb5O70309 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Itgb5O70309 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Itgb5O70309 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb5O70309 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Itgb5O70309 Gm17971-201ENSMUST00000190239 806 ntBASIC18.68■□□□□ 0.58
Itgb5O70309 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Itgb5O70309 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.68■□□□□ 0.58
Itgb5O70309 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb5O70309 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Itgb5O70309 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Itgb5O70309 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.68■□□□□ 0.58
Itgb5O70309 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Itgb5O70309 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.67■□□□□ 0.58
Itgb5O70309 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Itgb5O70309 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.67■□□□□ 0.58
Itgb5O70309 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Itgb5O70309 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Itgb5O70309 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Itgb5O70309 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.66■□□□□ 0.58
Itgb5O70309 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Itgb5O70309 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Itgb5O70309 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Itgb5O70309 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.66■□□□□ 0.58
Itgb5O70309 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Itgb5O70309 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.65■□□□□ 0.58
Itgb5O70309 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Itgb5O70309 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Itgb5O70309 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.65■□□□□ 0.58
Itgb5O70309 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Itgb5O70309 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Itgb5O70309 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb5O70309 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb5O70309 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Itgb5O70309 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb5O70309 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb5O70309 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Itgb5O70309 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.64■□□□□ 0.57
Itgb5O70309 Gm27741-201ENSMUST00000185060 237 ntBASIC18.64■□□□□ 0.57
Itgb5O70309 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.64■□□□□ 0.57
Itgb5O70309 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Itgb5O70309 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.64■□□□□ 0.57
Itgb5O70309 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb5O70309 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Itgb5O70309 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms