Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.98■□□□□ 0.15
Rdh5O55240 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rdh5O55240 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rdh5O55240 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.98■□□□□ 0.15
Rdh5O55240 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rdh5O55240 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.97■□□□□ 0.15
Rdh5O55240 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.97■□□□□ 0.15
Rdh5O55240 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.97■□□□□ 0.15
Rdh5O55240 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rdh5O55240 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Rdh5O55240 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rdh5O55240 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Rdh5O55240 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Rdh5O55240 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Rdh5O55240 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Rdh5O55240 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Rdh5O55240 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Rdh5O55240 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Gm18958-201ENSMUST00000174258 762 ntBASIC15.96■□□□□ 0.15
Rdh5O55240 Gm27000-201ENSMUST00000182943 842 ntBASIC15.96■□□□□ 0.15
Rdh5O55240 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.96■□□□□ 0.15
Rdh5O55240 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.96■□□□□ 0.15
Rdh5O55240 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rdh5O55240 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rdh5O55240 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rdh5O55240 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Rdh5O55240 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rdh5O55240 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Rdh5O55240 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rdh5O55240 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rdh5O55240 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Gm27463-201ENSMUST00000183569 57 ntBASIC15.95■□□□□ 0.14
Rdh5O55240 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.95■□□□□ 0.14
Rdh5O55240 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Gm9987-201ENSMUST00000069768 567 ntBASIC15.95■□□□□ 0.14
Rdh5O55240 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Rdh5O55240 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Rdh5O55240 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rdh5O55240 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rdh5O55240 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rdh5O55240 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.94■□□□□ 0.14
Rdh5O55240 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rdh5O55240 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rdh5O55240 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms