Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.54■□□□□ 0.56
Trdmt1O55055 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdmt1O55055 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.53■□□□□ 0.56
Trdmt1O55055 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.53■□□□□ 0.56
Trdmt1O55055 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.53■□□□□ 0.56
Trdmt1O55055 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 Gm44430-201ENSMUST00000203376 995 ntBASIC18.53■□□□□ 0.56
Trdmt1O55055 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trdmt1O55055 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdmt1O55055 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.53■□□□□ 0.56
Trdmt1O55055 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.52■□□□□ 0.56
Trdmt1O55055 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdmt1O55055 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trdmt1O55055 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdmt1O55055 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdmt1O55055 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trdmt1O55055 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trdmt1O55055 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trdmt1O55055 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.52■□□□□ 0.56
Trdmt1O55055 Gm44454-201ENSMUST00000198541 138 ntBASIC18.52■□□□□ 0.56
Trdmt1O55055 Gm8969-201ENSMUST00000199694 526 ntBASIC18.52■□□□□ 0.56
Trdmt1O55055 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.52■□□□□ 0.56
Trdmt1O55055 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.52■□□□□ 0.56
Trdmt1O55055 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.52■□□□□ 0.55
Trdmt1O55055 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trdmt1O55055 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.51■□□□□ 0.55
Trdmt1O55055 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Gm15165-201ENSMUST00000118140 502 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trdmt1O55055 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 Gm27867-201ENSMUST00000184778 125 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.51■□□□□ 0.55
Trdmt1O55055 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdmt1O55055 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trdmt1O55055 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trdmt1O55055 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Trdmt1O55055 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.5■□□□□ 0.55
Trdmt1O55055 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.5■□□□□ 0.55
Trdmt1O55055 Gm6296-201ENSMUST00000222599 943 ntBASIC18.5■□□□□ 0.55
Trdmt1O55055 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trdmt1O55055 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Trdmt1O55055 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.49■□□□□ 0.55
Trdmt1O55055 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Trdmt1O55055 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.49■□□□□ 0.55
Trdmt1O55055 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.49■□□□□ 0.55
Trdmt1O55055 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.49■□□□□ 0.55
Trdmt1O55055 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.49■□□□□ 0.55
Trdmt1O55055 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Trdmt1O55055 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdmt1O55055 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.48■□□□□ 0.55
Trdmt1O55055 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trdmt1O55055 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Trdmt1O55055 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdmt1O55055 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms