Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cxcl13O55038 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Cxcl13O55038 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.27□□□□□ -0.13
Cxcl13O55038 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.27□□□□□ -0.13
Cxcl13O55038 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.27□□□□□ -0.13
Cxcl13O55038 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cxcl13O55038 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Cxcl13O55038 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Mir3081-201ENSMUST00000175305 84 ntBASIC14.26□□□□□ -0.13
Cxcl13O55038 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Gm18669-201ENSMUST00000216049 778 ntBASIC14.26□□□□□ -0.13
Cxcl13O55038 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cxcl13O55038 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cxcl13O55038 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cxcl13O55038 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.25□□□□□ -0.13
Cxcl13O55038 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.25□□□□□ -0.13
Cxcl13O55038 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cxcl13O55038 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cxcl13O55038 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cxcl13O55038 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cxcl13O55038 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm27357-201ENSMUST00000183754 135 ntBASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm28033-201ENSMUST00000184224 96 ntBASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm27741-201ENSMUST00000185060 237 ntBASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm44450-201ENSMUST00000199528 114 ntBASIC14.24□□□□□ -0.13
Cxcl13O55038 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cxcl13O55038 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.24□□□□□ -0.13
Cxcl13O55038 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cxcl13O55038 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cxcl13O55038 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.23□□□□□ -0.13
Cxcl13O55038 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cxcl13O55038 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.23□□□□□ -0.13
Cxcl13O55038 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms