Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.56■□□□□ 0.56
Prom1O54990 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.56■□□□□ 0.56
Prom1O54990 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
Prom1O54990 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.56■□□□□ 0.56
Prom1O54990 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Prom1O54990 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.55■□□□□ 0.56
Prom1O54990 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Prom1O54990 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Prom1O54990 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Prom1O54990 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prom1O54990 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 Gm27867-201ENSMUST00000184778 125 ntBASIC18.54■□□□□ 0.56
Prom1O54990 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.54■□□□□ 0.56
Prom1O54990 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prom1O54990 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.54■□□□□ 0.56
Prom1O54990 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prom1O54990 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Prom1O54990 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Gm12644-201ENSMUST00000119935 606 ntBASIC18.53■□□□□ 0.56
Prom1O54990 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Prom1O54990 Gm10052-201ENSMUST00000168019 960 ntBASIC18.53■□□□□ 0.56
Prom1O54990 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.53■□□□□ 0.56
Prom1O54990 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Gm7729-201ENSMUST00000050143 801 ntBASIC18.53■□□□□ 0.56
Prom1O54990 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.53■□□□□ 0.56
Prom1O54990 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Prom1O54990 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prom1O54990 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Prom1O54990 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Prom1O54990 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Prom1O54990 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Prom1O54990 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.52■□□□□ 0.56
Prom1O54990 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Prom1O54990 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prom1O54990 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prom1O54990 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prom1O54990 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prom1O54990 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prom1O54990 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.52■□□□□ 0.55
Prom1O54990 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Prom1O54990 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prom1O54990 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prom1O54990 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Prom1O54990 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Prom1O54990 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.51■□□□□ 0.55
Prom1O54990 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.51■□□□□ 0.55
Prom1O54990 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prom1O54990 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Prom1O54990 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Prom1O54990 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms