Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm7284-201ENSMUST00000131667 944 ntBASIC17.52■□□□□ 0.4
Cldn5O54942 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn5O54942 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.52■□□□□ 0.4
Cldn5O54942 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn5O54942 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn5O54942 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
Cldn5O54942 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Cldn5O54942 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn5O54942 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn5O54942 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn5O54942 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.52■□□□□ 0.39
Cldn5O54942 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.52■□□□□ 0.39
Cldn5O54942 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Cldn5O54942 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Gm11336-201ENSMUST00000118168 334 ntBASIC17.51■□□□□ 0.39
Cldn5O54942 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.51■□□□□ 0.39
Cldn5O54942 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.51■□□□□ 0.39
Cldn5O54942 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
Cldn5O54942 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.51■□□□□ 0.39
Cldn5O54942 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cldn5O54942 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.5■□□□□ 0.39
Cldn5O54942 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.5■□□□□ 0.39
Cldn5O54942 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.5■□□□□ 0.39
Cldn5O54942 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cldn5O54942 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Gm6623-201ENSMUST00000173570 544 ntBASIC17.5■□□□□ 0.39
Cldn5O54942 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.5■□□□□ 0.39
Cldn5O54942 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.5■□□□□ 0.39
Cldn5O54942 Gm18115-201ENSMUST00000221209 621 ntBASIC17.5■□□□□ 0.39
Cldn5O54942 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.5■□□□□ 0.39
Cldn5O54942 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Cldn5O54942 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cldn5O54942 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.49■□□□□ 0.39
Cldn5O54942 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cldn5O54942 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cldn5O54942 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.49■□□□□ 0.39
Cldn5O54942 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cldn5O54942 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.48■□□□□ 0.39
Cldn5O54942 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cldn5O54942 Gm11950-201ENSMUST00000121615 838 ntBASIC17.48■□□□□ 0.39
Cldn5O54942 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Cldn5O54942 Gm27704-201ENSMUST00000185094 107 ntBASIC17.48■□□□□ 0.39
Cldn5O54942 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Cldn5O54942 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.48■□□□□ 0.39
Cldn5O54942 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.48■□□□□ 0.39
Cldn5O54942 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cldn5O54942 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cldn5O54942 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.47■□□□□ 0.39
Cldn5O54942 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cldn5O54942 Gm14859-201ENSMUST00000117752 357 ntBASIC17.47■□□□□ 0.39
Cldn5O54942 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Cldn5O54942 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Cldn5O54942 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms