Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SpibO35906 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.56■□□□□ 0.56
SpibO35906 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.56■□□□□ 0.56
SpibO35906 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.56■□□□□ 0.56
SpibO35906 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SpibO35906 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SpibO35906 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SpibO35906 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.55■□□□□ 0.56
SpibO35906 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.55■□□□□ 0.56
SpibO35906 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Gm12644-201ENSMUST00000119935 606 ntBASIC18.55■□□□□ 0.56
SpibO35906 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Gm10052-201ENSMUST00000168019 960 ntBASIC18.55■□□□□ 0.56
SpibO35906 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SpibO35906 Gm44430-201ENSMUST00000203376 995 ntBASIC18.55■□□□□ 0.56
SpibO35906 AW822252-206ENSMUST00000208904 237 ntBASIC18.55■□□□□ 0.56
SpibO35906 Gm7729-201ENSMUST00000050143 801 ntBASIC18.55■□□□□ 0.56
SpibO35906 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SpibO35906 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Rprl3-201ENSMUST00000157400 290 ntBASIC18.54■□□□□ 0.56
SpibO35906 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SpibO35906 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
SpibO35906 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
SpibO35906 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.54■□□□□ 0.56
SpibO35906 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
SpibO35906 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SpibO35906 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.53■□□□□ 0.56
SpibO35906 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Gm27867-201ENSMUST00000184778 125 ntBASIC18.53■□□□□ 0.56
SpibO35906 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SpibO35906 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SpibO35906 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SpibO35906 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SpibO35906 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SpibO35906 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SpibO35906 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SpibO35906 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
SpibO35906 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.52■□□□□ 0.56
SpibO35906 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.52■□□□□ 0.56
SpibO35906 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SpibO35906 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SpibO35906 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SpibO35906 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SpibO35906 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
SpibO35906 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SpibO35906 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SpibO35906 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SpibO35906 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SpibO35906 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SpibO35906 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SpibO35906 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.51■□□□□ 0.55
SpibO35906 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.51■□□□□ 0.55
SpibO35906 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.51■□□□□ 0.55
SpibO35906 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SpibO35906 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SpibO35906 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SpibO35906 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms