Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptlc1O35704 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.43■□□□□ 0.54
Sptlc1O35704 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Sptlc1O35704 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Sptlc1O35704 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
Sptlc1O35704 Gm32390-201ENSMUST00000212713 1172 ntBASIC18.43■□□□□ 0.54
Sptlc1O35704 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Sptlc1O35704 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sptlc1O35704 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptlc1O35704 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptlc1O35704 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptlc1O35704 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sptlc1O35704 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.42■□□□□ 0.54
Sptlc1O35704 Birc2-201ENSMUST00000054878 378 ntBASIC18.42■□□□□ 0.54
Sptlc1O35704 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sptlc1O35704 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sptlc1O35704 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.41■□□□□ 0.54
Sptlc1O35704 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sptlc1O35704 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.4■□□□□ 0.54
Sptlc1O35704 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.4■□□□□ 0.54
Sptlc1O35704 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.4■□□□□ 0.54
Sptlc1O35704 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sptlc1O35704 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sptlc1O35704 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Sptlc1O35704 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sptlc1O35704 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sptlc1O35704 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sptlc1O35704 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Gm12895-201ENSMUST00000122214 226 ntBASIC18.38■□□□□ 0.53
Sptlc1O35704 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Sptlc1O35704 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Sptlc1O35704 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Sptlc1O35704 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sptlc1O35704 Gm44711-201ENSMUST00000205414 1264 ntBASIC18.38■□□□□ 0.53
Sptlc1O35704 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms