Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.12■□□□□ 0.49
Nr1i3O35627 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.12■□□□□ 0.49
Nr1i3O35627 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Gm10653-202ENSMUST00000139570 835 ntBASIC18.12■□□□□ 0.49
Nr1i3O35627 Timm23-208ENSMUST00000226683 750 ntBASIC18.12■□□□□ 0.49
Nr1i3O35627 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Nr1i3O35627 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.12■□□□□ 0.49
Nr1i3O35627 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nr1i3O35627 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Nr1i3O35627 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Nr1i3O35627 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nr1i3O35627 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Nr1i3O35627 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Nr1i3O35627 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nr1i3O35627 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Mir1199-201ENSMUST00000117015 119 ntBASIC18.1■□□□□ 0.49
Nr1i3O35627 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.1■□□□□ 0.49
Nr1i3O35627 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nr1i3O35627 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nr1i3O35627 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Nr1i3O35627 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nr1i3O35627 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.09■□□□□ 0.49
Nr1i3O35627 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Nr1i3O35627 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Odf3b-204ENSMUST00000227834 930 ntBASIC18.09■□□□□ 0.49
Nr1i3O35627 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Nr1i3O35627 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nr1i3O35627 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.08■□□□□ 0.49
Nr1i3O35627 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1i3O35627 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1i3O35627 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nr1i3O35627 Gm18958-201ENSMUST00000174258 762 ntBASIC18.08■□□□□ 0.48
Nr1i3O35627 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.08■□□□□ 0.48
Nr1i3O35627 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.08■□□□□ 0.48
Nr1i3O35627 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.08■□□□□ 0.48
Nr1i3O35627 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nr1i3O35627 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.08■□□□□ 0.48
Nr1i3O35627 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Nr1i3O35627 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.08■□□□□ 0.48
Nr1i3O35627 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nr1i3O35627 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms