Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.82■□□□□ 0.12
Abca4O35600 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.82■□□□□ 0.12
Abca4O35600 Gm12428-201ENSMUST00000119844 727 ntBASIC15.82■□□□□ 0.12
Abca4O35600 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.82■□□□□ 0.12
Abca4O35600 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.82■□□□□ 0.12
Abca4O35600 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.82■□□□□ 0.12
Abca4O35600 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Abca4O35600 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.81■□□□□ 0.12
Abca4O35600 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.81■□□□□ 0.12
Abca4O35600 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Abca4O35600 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Abca4O35600 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Gm44450-201ENSMUST00000199528 114 ntBASIC15.8■□□□□ 0.12
Abca4O35600 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.8■□□□□ 0.12
Abca4O35600 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Abca4O35600 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Abca4O35600 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.8■□□□□ 0.12
Abca4O35600 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.8■□□□□ 0.12
Abca4O35600 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Abca4O35600 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.8■□□□□ 0.12
Abca4O35600 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Abca4O35600 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.8■□□□□ 0.12
Abca4O35600 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.79■□□□□ 0.12
Abca4O35600 Grk6-206ENSMUST00000224995 2971 ntBASIC15.79■□□□□ 0.12
Abca4O35600 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.79■□□□□ 0.12
Abca4O35600 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.79■□□□□ 0.12
Abca4O35600 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.79■□□□□ 0.12
Abca4O35600 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Abca4O35600 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.78■□□□□ 0.12
Abca4O35600 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.78■□□□□ 0.12
Abca4O35600 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Abca4O35600 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.78■□□□□ 0.12
Abca4O35600 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
Abca4O35600 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Abca4O35600 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Abca4O35600 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca4O35600 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca4O35600 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.77■□□□□ 0.12
Abca4O35600 Gm13823-201ENSMUST00000119930 345 ntBASIC15.77■□□□□ 0.12
Abca4O35600 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.77■□□□□ 0.12
Abca4O35600 Gm5866-201ENSMUST00000177881 973 ntBASIC15.77■□□□□ 0.12
Abca4O35600 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca4O35600 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca4O35600 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Abca4O35600 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms