Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Gm16061-201ENSMUST00000122167 857 ntBASIC15.84■□□□□ 0.13
Cx3cl1O35188 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.84■□□□□ 0.13
Cx3cl1O35188 Gm45058-201ENSMUST00000205810 766 ntBASIC15.84■□□□□ 0.13
Cx3cl1O35188 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.84■□□□□ 0.13
Cx3cl1O35188 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cx3cl1O35188 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.83■□□□□ 0.13
Cx3cl1O35188 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cx3cl1O35188 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cx3cl1O35188 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Cx3cl1O35188 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Gm13836-201ENSMUST00000121159 501 ntBASIC15.83■□□□□ 0.12
Cx3cl1O35188 Gm13474-201ENSMUST00000122466 815 ntBASIC15.83■□□□□ 0.12
Cx3cl1O35188 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Mir5130-201ENSMUST00000175160 84 ntBASIC15.83■□□□□ 0.12
Cx3cl1O35188 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cx3cl1O35188 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.82■□□□□ 0.12
Cx3cl1O35188 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Gm10231-201ENSMUST00000181584 441 ntBASIC15.82■□□□□ 0.12
Cx3cl1O35188 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Gm10175-202ENSMUST00000208752 441 ntBASIC15.82■□□□□ 0.12
Cx3cl1O35188 Gm7370-201ENSMUST00000219471 767 ntBASIC15.82■□□□□ 0.12
Cx3cl1O35188 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.82■□□□□ 0.12
Cx3cl1O35188 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cx3cl1O35188 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cx3cl1O35188 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.81■□□□□ 0.12
Cx3cl1O35188 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Cx3cl1O35188 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms