Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Hdac1O09106 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.09■□□□□ 0.81
Hdac1O09106 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Hdac1O09106 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Hdac1O09106 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.09■□□□□ 0.81
Hdac1O09106 Gm18666-201ENSMUST00000190039 958 ntBASIC20.09■□□□□ 0.81
Hdac1O09106 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.09■□□□□ 0.81
Hdac1O09106 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hdac1O09106 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.08■□□□□ 0.81
Hdac1O09106 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Hdac1O09106 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.08■□□□□ 0.81
Hdac1O09106 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac1O09106 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.08■□□□□ 0.81
Hdac1O09106 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.08■□□□□ 0.81
Hdac1O09106 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hdac1O09106 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Hdac1O09106 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hdac1O09106 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hdac1O09106 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hdac1O09106 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hdac1O09106 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hdac1O09106 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.07■□□□□ 0.8
Hdac1O09106 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.07■□□□□ 0.8
Hdac1O09106 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.07■□□□□ 0.8
Hdac1O09106 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.07■□□□□ 0.8
Hdac1O09106 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.07■□□□□ 0.8
Hdac1O09106 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac1O09106 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.06■□□□□ 0.8
Hdac1O09106 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.06■□□□□ 0.8
Hdac1O09106 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.06■□□□□ 0.8
Hdac1O09106 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hdac1O09106 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac1O09106 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.05■□□□□ 0.8
Hdac1O09106 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac1O09106 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.04■□□□□ 0.8
Hdac1O09106 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.04■□□□□ 0.8
Hdac1O09106 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac1O09106 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.03■□□□□ 0.8
Hdac1O09106 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac1O09106 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac1O09106 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac1O09106 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac1O09106 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac1O09106 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac1O09106 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms