Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trove2O08848 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trove2O08848 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trove2O08848 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trove2O08848 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trove2O08848 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.33■□□□□ 0.36
Trove2O08848 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Zfp783-201ENSMUST00000095946 670 ntBASIC17.33■□□□□ 0.36
Trove2O08848 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trove2O08848 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.33■□□□□ 0.36
Trove2O08848 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.33■□□□□ 0.36
Trove2O08848 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trove2O08848 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trove2O08848 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trove2O08848 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.32■□□□□ 0.36
Trove2O08848 Gm2559-201ENSMUST00000201323 363 ntBASIC17.32■□□□□ 0.36
Trove2O08848 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.32■□□□□ 0.36
Trove2O08848 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trove2O08848 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trove2O08848 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
Trove2O08848 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trove2O08848 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trove2O08848 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trove2O08848 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trove2O08848 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.31■□□□□ 0.36
Trove2O08848 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Gm4968-201ENSMUST00000071458 858 ntBASIC17.31■□□□□ 0.36
Trove2O08848 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trove2O08848 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trove2O08848 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trove2O08848 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.3■□□□□ 0.36
Trove2O08848 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.3■□□□□ 0.36
Trove2O08848 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trove2O08848 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.3■□□□□ 0.36
Trove2O08848 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms