Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ercc2O08811 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.26■□□□□ 0.35
Ercc2O08811 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.26■□□□□ 0.35
Ercc2O08811 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.26■□□□□ 0.35
Ercc2O08811 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ercc2O08811 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.26■□□□□ 0.35
Ercc2O08811 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ercc2O08811 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ercc2O08811 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc2O08811 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.25■□□□□ 0.35
Ercc2O08811 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ercc2O08811 Gm6433-201ENSMUST00000118634 875 ntBASIC17.25■□□□□ 0.35
Ercc2O08811 Gm13474-201ENSMUST00000122466 815 ntBASIC17.25■□□□□ 0.35
Ercc2O08811 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ercc2O08811 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ercc2O08811 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ercc2O08811 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ercc2O08811 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.24■□□□□ 0.35
Ercc2O08811 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.24■□□□□ 0.35
Ercc2O08811 Gm18959-201ENSMUST00000208954 655 ntBASIC17.24■□□□□ 0.35
Ercc2O08811 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ercc2O08811 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.24■□□□□ 0.35
Ercc2O08811 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.24■□□□□ 0.35
Ercc2O08811 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ercc2O08811 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ercc2O08811 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ercc2O08811 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ercc2O08811 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.23■□□□□ 0.35
Ercc2O08811 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.23■□□□□ 0.35
Ercc2O08811 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.23■□□□□ 0.35
Ercc2O08811 Mir5130-201ENSMUST00000175160 84 ntBASIC17.23■□□□□ 0.35
Ercc2O08811 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.23■□□□□ 0.35
Ercc2O08811 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.23■□□□□ 0.35
Ercc2O08811 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ercc2O08811 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc2O08811 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.22■□□□□ 0.35
Ercc2O08811 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Ercc2O08811 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.22■□□□□ 0.35
Ercc2O08811 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.22■□□□□ 0.35
Ercc2O08811 Gm45058-201ENSMUST00000205810 766 ntBASIC17.22■□□□□ 0.35
Ercc2O08811 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc2O08811 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms