Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfrsf11bO08712 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Mir1199-201ENSMUST00000117015 119 ntBASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tnfrsf11bO08712 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Il3ra-202ENSMUST00000223589 738 ntBASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tnfrsf11bO08712 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gm13168-201ENSMUST00000121771 632 ntBASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf11bO08712 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf11bO08712 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms