Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
B020004C17RikJ3QP07 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
B020004C17RikJ3QP07 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
B020004C17RikJ3QP07 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
B020004C17RikJ3QP07 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Mir5126-201ENSMUST00000175513 77 ntBASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Gm8000-201ENSMUST00000188378 592 ntBASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
B020004C17RikJ3QP07 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
B020004C17RikJ3QP07 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
B020004C17RikJ3QP07 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms