Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Gm18421-201ENSMUST00000204122 625 ntBASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim34bJ3QNR8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim34bJ3QNR8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim34bJ3QNR8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim34bJ3QNR8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim34bJ3QNR8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim34bJ3QNR8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Trim34bJ3QNR8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim34bJ3QNR8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Gm24589-201ENSMUST00000116692 94 ntBASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim34bJ3QNR8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim34bJ3QNR8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim34bJ3QNR8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms