Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm37722-201ENSMUST00000193757 208 ntBASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Top6blJ3QMY9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Top6blJ3QMY9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Top6blJ3QMY9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Top6blJ3QMY9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Top6blJ3QMY9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Top6blJ3QMY9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.64■□□□□ 0.42
Top6blJ3QMY9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.64■□□□□ 0.41
Top6blJ3QMY9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Top6blJ3QMY9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Gm9013-201ENSMUST00000132939 882 ntBASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Gm44450-201ENSMUST00000199528 114 ntBASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Gm5587-201ENSMUST00000206270 674 ntBASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Top6blJ3QMY9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Top6blJ3QMY9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Top6blJ3QMY9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms