Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Gm11355-201ENSMUST00000121120 306 ntBASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Gm6345-202ENSMUST00000180900 204 ntBASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm3336J3QMQ6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3336J3QMQ6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3336J3QMQ6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3336J3QMQ6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3336J3QMQ6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3336J3QMQ6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3336J3QMQ6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3336J3QMQ6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3336J3QMQ6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Gm11336-201ENSMUST00000118168 334 ntBASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3336J3QMQ6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3336J3QMQ6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3336J3QMQ6 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.31■□□□□ 0.36
Gm3336J3QMQ6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3336J3QMQ6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3336J3QMQ6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms