Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.83■□□□□ 0.28
Gm3139J3QK78 Gm37722-201ENSMUST00000193757 208 ntBASIC16.83■□□□□ 0.28
Gm3139J3QK78 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3139J3QK78 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.82■□□□□ 0.28
Gm3139J3QK78 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Gm3139J3QK78 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Gm18115-201ENSMUST00000221209 621 ntBASIC16.82■□□□□ 0.28
Gm3139J3QK78 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Phf7-203ENSMUST00000226565 1971 ntBASIC16.82■□□□□ 0.28
Gm3139J3QK78 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3139J3QK78 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Gm11336-201ENSMUST00000118168 334 ntBASIC16.81■□□□□ 0.28
Gm3139J3QK78 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3139J3QK78 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.8■□□□□ 0.28
Gm3139J3QK78 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.8■□□□□ 0.28
Gm3139J3QK78 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3139J3QK78 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3139J3QK78 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.8■□□□□ 0.28
Gm3139J3QK78 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.8■□□□□ 0.28
Gm3139J3QK78 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3139J3QK78 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3139J3QK78 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3139J3QK78 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Gm3139J3QK78 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3139J3QK78 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3139J3QK78 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm3139J3QK78 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.79■□□□□ 0.28
Gm3139J3QK78 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.79■□□□□ 0.28
Gm3139J3QK78 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm3139J3QK78 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms