Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh11xF6ZNL5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Gm11539-201ENSMUST00000119837 557 ntBASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Gm13436-201ENSMUST00000120418 567 ntBASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh11xF6ZNL5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh11xF6ZNL5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh11xF6ZNL5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh11xF6ZNL5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh11xF6ZNL5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms