Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.23■□□□□ 0.83
Ube4aE9Q735 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Rprl3-201ENSMUST00000157400 290 ntBASIC20.23■□□□□ 0.83
Ube4aE9Q735 Gm10052-201ENSMUST00000168019 960 ntBASIC20.23■□□□□ 0.83
Ube4aE9Q735 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Gm44430-201ENSMUST00000203376 995 ntBASIC20.23■□□□□ 0.83
Ube4aE9Q735 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.23■□□□□ 0.83
Ube4aE9Q735 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Gm7729-201ENSMUST00000050143 801 ntBASIC20.23■□□□□ 0.83
Ube4aE9Q735 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ube4aE9Q735 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Ube4aE9Q735 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.22■□□□□ 0.83
Ube4aE9Q735 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.22■□□□□ 0.83
Ube4aE9Q735 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ube4aE9Q735 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.22■□□□□ 0.83
Ube4aE9Q735 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.21■□□□□ 0.83
Ube4aE9Q735 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.21■□□□□ 0.83
Ube4aE9Q735 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Gm5864-201ENSMUST00000202263 970 ntBASIC20.21■□□□□ 0.83
Ube4aE9Q735 Gm44771-201ENSMUST00000206975 626 ntBASIC20.21■□□□□ 0.83
Ube4aE9Q735 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ube4aE9Q735 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Mir8098-201ENSMUST00000184011 137 ntBASIC20.2■□□□□ 0.82
Ube4aE9Q735 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ube4aE9Q735 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4aE9Q735 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.19■□□□□ 0.82
Ube4aE9Q735 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4aE9Q735 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ube4aE9Q735 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms