Protein–RNA interactions for Protein: E9Q235

Vmn1r88, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r88E9Q235 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vmn1r88E9Q235 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 AW822252-206ENSMUST00000208904 237 ntBASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vmn1r88E9Q235 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vmn1r88E9Q235 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vmn1r88E9Q235 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Gm44430-201ENSMUST00000203376 995 ntBASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Gm5867-201ENSMUST00000063197 592 ntBASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vmn1r88E9Q235 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Gm44454-201ENSMUST00000198541 138 ntBASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vmn1r88E9Q235 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms