Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Gm25948-201ENSMUST00000175334 112 ntBASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Col6a3E9PWQ3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a3E9PWQ3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a3E9PWQ3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Mir1895-201ENSMUST00000122615 79 ntBASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Notumos-201ENSMUST00000151998 2659 ntBASIC16.83■□□□□ 0.29
Col6a3E9PWQ3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Gm13223-201ENSMUST00000118609 747 ntBASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Gm44492-201ENSMUST00000197012 141 ntBASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col6a3E9PWQ3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Mir6990-201ENSMUST00000183724 91 ntBASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a3E9PWQ3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Gm6912-201ENSMUST00000117218 544 ntBASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Gm13365-201ENSMUST00000121188 973 ntBASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Mir1938-201ENSMUST00000158746 100 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms