Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Hfm1D3Z4R1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Gm9727-201ENSMUST00000161387 555 ntBASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 AC225888.1-201ENSMUST00000227184 728 ntBASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Hfm1D3Z4R1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Gm24513-201ENSMUST00000174964 138 ntBASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Grk6-206ENSMUST00000224995 2971 ntBASIC23.66■■□□□ 1.38
Hfm1D3Z4R1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Gm6089-201ENSMUST00000197666 938 ntBASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC23.65■■□□□ 1.38
Hfm1D3Z4R1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC23.64■■□□□ 1.38
Hfm1D3Z4R1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hfm1D3Z4R1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Hfm1D3Z4R1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC23.64■■□□□ 1.38
Hfm1D3Z4R1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Gm13036-201ENSMUST00000117799 748 ntBASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Gm14822-201ENSMUST00000122247 291 ntBASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Gm12497-201ENSMUST00000138778 237 ntBASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Gm10175-201ENSMUST00000086013 645 ntBASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Hfm1D3Z4R1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Gm8097-201ENSMUST00000117903 829 ntBASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Gm11780-201ENSMUST00000136880 516 ntBASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Gm7507-201ENSMUST00000183053 1008 ntBASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Gm27397-201ENSMUST00000184997 107 ntBASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 AC084391.1-201ENSMUST00000200651 141 ntBASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC23.63■■□□□ 1.37
Hfm1D3Z4R1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Gm25911-201ENSMUST00000157621 56 ntBASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Gm8349-201ENSMUST00000182720 1003 ntBASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Gm27628-201ENSMUST00000184911 107 ntBASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Hfm1D3Z4R1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 AC154757.1-201ENSMUST00000228289 336 ntBASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms