Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm8655-201ENSMUST00000221159 852 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm9885-202ENSMUST00000186234 2209 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm27646-201ENSMUST00000183989 110 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm44450-201ENSMUST00000199528 114 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 AC154239.3-201ENSMUST00000226933 674 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Gm27306-201ENSMUST00000183970 107 ntBASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmcn1D3YXG0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm45331-201ENSMUST00000209868 554 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm45612-201ENSMUST00000211320 160 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm12497-201ENSMUST00000138778 237 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm4899-201ENSMUST00000178708 719 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Gm8602-201ENSMUST00000184045 607 ntBASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC4.85□□□□□ -1.63
Hmcn1D3YXG0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms