Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.87■□□□□ 0.45
Rfx8D3YU81 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx8D3YU81 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Gm18958-201ENSMUST00000174258 762 ntBASIC17.86■□□□□ 0.45
Rfx8D3YU81 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx8D3YU81 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx8D3YU81 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.84■□□□□ 0.45
Rfx8D3YU81 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Gm13474-201ENSMUST00000122466 815 ntBASIC17.84■□□□□ 0.45
Rfx8D3YU81 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfx8D3YU81 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx8D3YU81 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx8D3YU81 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Rfx8D3YU81 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx8D3YU81 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx8D3YU81 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rfx8D3YU81 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx8D3YU81 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rfx8D3YU81 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rfx8D3YU81 Gm6433-201ENSMUST00000118634 875 ntBASIC17.83■□□□□ 0.44
Rfx8D3YU81 Gm16061-201ENSMUST00000122167 857 ntBASIC17.83■□□□□ 0.44
Rfx8D3YU81 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.83■□□□□ 0.44
Rfx8D3YU81 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx8D3YU81 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.83■□□□□ 0.44
Rfx8D3YU81 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfx8D3YU81 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Rfx8D3YU81 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rfx8D3YU81 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms