Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Syce3B5KM66 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Syce3B5KM66 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Syce3B5KM66 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.36■□□□□ 0.69
Syce3B5KM66 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Syce3B5KM66 Mtag2-201ENSMUST00000058665 714 ntBASIC19.36■□□□□ 0.69
Syce3B5KM66 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Syce3B5KM66 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Syce3B5KM66 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Syce3B5KM66 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Syce3B5KM66 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Syce3B5KM66 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.34■□□□□ 0.69
Syce3B5KM66 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.34■□□□□ 0.69
Syce3B5KM66 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.34■□□□□ 0.69
Syce3B5KM66 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Syce3B5KM66 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Syce3B5KM66 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Syce3B5KM66 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Syce3B5KM66 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.34■□□□□ 0.69
Syce3B5KM66 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Syce3B5KM66 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Syce3B5KM66 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Syce3B5KM66 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Syce3B5KM66 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Syce3B5KM66 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Syce3B5KM66 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Syce3B5KM66 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.32■□□□□ 0.68
Syce3B5KM66 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Syce3B5KM66 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Syce3B5KM66 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Syce3B5KM66 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.31■□□□□ 0.68
Syce3B5KM66 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Syce3B5KM66 Gm11927-201ENSMUST00000118472 759 ntBASIC19.31■□□□□ 0.68
Syce3B5KM66 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Syce3B5KM66 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.31■□□□□ 0.68
Syce3B5KM66 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Syce3B5KM66 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms