Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a6B1AVK5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a6B1AVK5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Col4a6B1AVK5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Col4a6B1AVK5 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.33■□□□□ 0.36
Col4a6B1AVK5 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.33■□□□□ 0.36
Col4a6B1AVK5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.33■□□□□ 0.36
Col4a6B1AVK5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Col4a6B1AVK5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Gm5264-201ENSMUST00000190584 848 ntBASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Gm13036-201ENSMUST00000117799 748 ntBASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a6B1AVK5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Gm27702-201ENSMUST00000184512 56 ntBASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a6B1AVK5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Gm4459-201ENSMUST00000118750 468 ntBASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Gm15173-201ENSMUST00000122049 433 ntBASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Gm12497-201ENSMUST00000138778 237 ntBASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.3■□□□□ 0.36
Col4a6B1AVK5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a6B1AVK5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Gm6550-201ENSMUST00000187574 993 ntBASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Gm8097-201ENSMUST00000117903 829 ntBASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col4a6B1AVK5 Gm2213-201ENSMUST00000197485 688 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms