Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tgds-204ENSMUST00000228543 1594 ntBASIC13.7□□□□□ -0.22
Chd6A3KFM7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Gm7653-201ENSMUST00000214567 508 ntBASIC13.7□□□□□ -0.22
Chd6A3KFM7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.7□□□□□ -0.22
Chd6A3KFM7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.69□□□□□ -0.22
Chd6A3KFM7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.69□□□□□ -0.22
Chd6A3KFM7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chd6A3KFM7 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.68□□□□□ -0.22
Chd6A3KFM7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd6A3KFM7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chd6A3KFM7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd6A3KFM7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.67□□□□□ -0.22
Chd6A3KFM7 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chd6A3KFM7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Gm9899-201ENSMUST00000065519 555 ntBASIC13.66□□□□□ -0.22
Chd6A3KFM7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Fst-202ENSMUST00000223640 2612 ntBASIC13.66□□□□□ -0.22
Chd6A3KFM7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chd6A3KFM7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Iqck-206ENSMUST00000208658 2891 ntBASIC13.65□□□□□ -0.22
Chd6A3KFM7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.65□□□□□ -0.22
Chd6A3KFM7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms