Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Gm15794-201ENSMUST00000120182 631 ntBASIC17.66■□□□□ 0.42
Scn1aA2APX8 Gm17807-201ENSMUST00000186869 298 ntBASIC17.66■□□□□ 0.42
Scn1aA2APX8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scn1aA2APX8 Gm14859-201ENSMUST00000117752 357 ntBASIC17.65■□□□□ 0.42
Scn1aA2APX8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Scn1aA2APX8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn1aA2APX8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scn1aA2APX8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.64■□□□□ 0.41
Scn1aA2APX8 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.64■□□□□ 0.41
Scn1aA2APX8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scn1aA2APX8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Gm28033-201ENSMUST00000184224 96 ntBASIC17.63■□□□□ 0.41
Scn1aA2APX8 Gm17971-201ENSMUST00000190239 806 ntBASIC17.63■□□□□ 0.41
Scn1aA2APX8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Scn1aA2APX8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.62■□□□□ 0.41
Scn1aA2APX8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.62■□□□□ 0.41
Scn1aA2APX8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.62■□□□□ 0.41
Scn1aA2APX8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Scn1aA2APX8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scn1aA2APX8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms