Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trav12d-1A0N8R0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-1A0N8R0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-1A0N8R0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-1A0N8R0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-1A0N8R0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12d-1A0N8R0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Gm12933-201ENSMUST00000120203 872 ntBASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Gm18025-201ENSMUST00000221733 862 ntBASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12d-1A0N8R0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gm11249-201ENSMUST00000117071 859 ntBASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gm13158-201ENSMUST00000122007 736 ntBASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12d-1A0N8R0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12d-1A0N8R0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms