Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv13-2A0A140T8N6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trbv13-2A0A140T8N6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm37055-201ENSMUST00000191866 133 ntBASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm7791-201ENSMUST00000219066 539 ntBASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trbv13-2A0A140T8N6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Gm27463-201ENSMUST00000183569 57 ntBASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Il3ra-202ENSMUST00000223589 738 ntBASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv13-2A0A140T8N6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms