Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Haglr-201ENSMUST00000100000 2085 ntBASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm26524-201ENSMUST00000192339 390 ntBASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav13d-4A0A0G2JFX3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm5408-201ENSMUST00000197998 747 ntBASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.64□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav13d-4A0A0G2JFX3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms