Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Mir5130-201ENSMUST00000175160 84 ntBASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-1A0A0G2JEU8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms