Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-2A0A0G2JDP3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav9n-2A0A0G2JDP3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9n-2A0A0G2JDP3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms