Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm10517-202ENSMUST00000192970 758 ntBASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv13-1A0A0B4J1P8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trbv13-1A0A0B4J1P8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Trbv13-1A0A0B4J1P8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm10418-201ENSMUST00000100943 576 ntBASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm12085-201ENSMUST00000119263 940 ntBASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv13-1A0A0B4J1P8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms