Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv26A0A0B4J1P5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv26A0A0B4J1P5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv26A0A0B4J1P5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv26A0A0B4J1P5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv26A0A0B4J1P5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm6433-201ENSMUST00000118634 875 ntBASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv26A0A0B4J1P5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm7889-201ENSMUST00000185591 958 ntBASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm18959-201ENSMUST00000208954 655 ntBASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv26A0A0B4J1P5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Gm9987-201ENSMUST00000069768 567 ntBASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv26A0A0B4J1P5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv26A0A0B4J1P5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms