Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.19■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm9103-201ENSMUST00000119371 405 ntBASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gm17807-201ENSMUST00000186869 298 ntBASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Igkv5-43A0A0B4J1J2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Igkv5-43A0A0B4J1J2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms