Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv16A0A0B4J1H3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm10517-202ENSMUST00000192970 758 ntBASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trbv16A0A0B4J1H3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm37292-201ENSMUST00000192062 758 ntBASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm37179-201ENSMUST00000194862 823 ntBASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv16A0A0B4J1H3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv16A0A0B4J1H3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm18666-201ENSMUST00000190039 958 ntBASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv16A0A0B4J1H3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms