Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm21559-201ENSMUST00000220638 855 ntBASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm8587-201ENSMUST00000076538 843 ntBASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm10013-201ENSMUST00000106074 672 ntBASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm11336-201ENSMUST00000118168 334 ntBASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms