Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm27742-201ENSMUST00000184667 60 ntBASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm44450-201ENSMUST00000199528 114 ntBASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm27357-201ENSMUST00000183754 135 ntBASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm29707-201ENSMUST00000196325 491 ntBASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.55■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm18669-201ENSMUST00000216049 778 ntBASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.53■□□□□ 0.08
Ighv1-43A0A0A6YXN5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms