Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-52A0A0A6YXC3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-52A0A0A6YXC3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ighv1-52A0A0A6YXC3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ighv1-52A0A0A6YXC3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ighv1-52A0A0A6YXC3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ighv1-52A0A0A6YXC3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Mir7071-201ENSMUST00000184847 69 ntBASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm9987-201ENSMUST00000069768 567 ntBASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.81□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ighv1-52A0A0A6YXC3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms