Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trbv23A0A0A6YWQ1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.53□□□□□ -0.08
Trbv23A0A0A6YWQ1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trbv23A0A0A6YWQ1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trbv23A0A0A6YWQ1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trbv23A0A0A6YWQ1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Flg-201ENSMUST00000050758 1488 ntBASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm2559-201ENSMUST00000201323 363 ntBASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.5□□□□□ -0.09
Trbv23A0A0A6YWQ1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms