Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 AC159205.6-201ENSMUST00000224935 887 ntBASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-4A0A075B6B4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-4A0A075B6B4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm11539-201ENSMUST00000119837 557 ntBASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm13436-201ENSMUST00000120418 567 ntBASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav6-4A0A075B6B4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Gm15565-201ENSMUST00000118890 427 ntBASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Gm13474-201ENSMUST00000122466 815 ntBASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-4A0A075B6B4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-4A0A075B6B4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms